3 reasons not to blame it on the Antibodies

Pivotal Scientific

Sep 8, 2015

Science 1

It is possible that the actual antibodies are not the real issue, as when used correctly, they carry out their function very well. However, without cooperation between biotech companies and researchers, the reproducibility problem will stay prevalent.

Author: Pivotal Scientific

Pivotal Scientific

Introduction

Antibodies have been pin pointed as the main culprit in the reproducibility issue surrounding the research reagents sector today. However is it too cynical and perhaps plain simplistic to place all the blame on the antibodies alone? Could it be that it is not just the antibodies that are the issue, but the way scientists and manufactures handle them?

As the title suggests, we will look at reasons other than antibodies that may have contributed to the reproducibility issue.

1)  Wrong information in citations

There is no doubt that many scientists look to literature and in particular citations to find ‘good’ antibodies. However, in spite of some publications describing successful use of a particular antibody, reproducibility is still pretty much unachievable.  Many have attributed this to errors in publications or the lack of information provided by authors. This is something that can be easily rectified and could reduce at least some of the inconsistencies observed in experimental results.

2)  OEM – a grey area

The google search engine is probably the most used platform to search for products on the web. But when searching for fit –for- purpose antibodies, it may not prove to be the most effective search medium. This is partly due to companies using OEM (original equipment manufacturer) agreements. This is a common method used by companies to rapidly increase their product portfolio. Sometimes, OEM can lead to the creation a grey area within the market and the lack of information given about original manufactures. This makes comparing antibodies from different suppliers very difficult – especially if they’re depending on the first supplier names that appear in the search!

For this reason, finding companies that produce their own antibodies and can provide up- to -date validation data is a big challenge for researchers who are not familiar with the biotech market. Websites such as CiteAb that help researchers find the right antibody and compare validation data are a lot of more representative of the biotech market.

3) Antibody Validation is always key

“I wasn’t trained to validate antibodies , I was just trained that you ordered them.”

Rimm (Nature Baker May 2015).

The question of what makes a ‘good antibody’ still remains, as an antibody may perform excellently in one application but perform disastrously in another. Fridtjof Lund-Johansen from Oslo University has developed a technology where many antibodies can be compared side to side. It was a high throughput kind of screening. He argues that without comparison it is difficult to differentiate the best antibodies. These are the ones that have a better signal or a stronger affinity than another antibody. Additionally, specificity of binding is also of great importance and could be tested by using knock-out samples within an essay. In other words without proper validation when using antibodies reproducibility will continue to be a problem.

Concluding remarks

The actual antibodies are not the real issue, as when used correctly, they carry out their function well. However, without cooperation between biotech companies and researchers, the reproducibility problem will stay prevalent. Biotech companies can make certain that all of their antibodies are validated and make this data as readily and accurately available to researchers as possible. Scientists, on the other hand, need to be open to more innovative ways of validating antibodies. They can also become savvier about the validation process and the requirements of their applications.

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